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APP

Chr 21q21.3

amyloid beta precursor protein

Aliases:
alpha-sAPP
MANE:
ENST00000346798.8

Annotations refreshed 1 month ago.

Predicted protein structure

Clinical relevance (Genomics England PanelApp)

Diagnostic Grade (Green)

  • Adult onset leukodystrophy

    MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
  • Adult onset neurodegenerative disorder

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
  • Early onset dementia (encompassing fronto-temporal dementia and prion disease)

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
  • Familial cerebral small vessel disease

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
  • Periodic fever syndromes

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Disease associations (Open Targets)

  • Alzheimer disease

    0.81
  • Alzheimer disease type 1

    0.79
  • cerebral amyloid angiopathy, APP-related

    0.75
  • dementia

    0.68
  • Hereditary cerebral hemorrhage with amyloidosis, Piedmont type

    0.64
  • Hereditary cerebral hemorrhage with amyloidosis, Dutch type

    0.64
  • Hereditary cerebral hemorrhage with amyloidosis, Italian type

    0.64
  • Hereditary cerebral hemorrhage with amyloidosis, Iowa type

    0.64
  • Hereditary cerebral hemorrhage with amyloidosis, Arctic type

    0.64
  • Hereditary cerebral hemorrhage with amyloidosis, Flemish type

    0.64

Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.

Protein function (UniProt)

Amyloid-beta precursor protein

Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Interaction between APP molecules on neighboring cells promotes synaptogenesis (PubMed:25122912). Involved in cell mobility and transcription regulation through protein-protein interactions. Can promote transcription activation through binding to APBB1-KAT5 and inhibits Notch signaling through interaction with Numb. Couples to apoptosis-inducing pathways such as those mediated by G(o) and JIP. Inhibits G(o) alpha ATPase activity (By similarity). Acts as a kinesin I membrane receptor, mediating the axonal transport of beta-secretase and presenilin 1 (By similarity). By acting as a kinesin I membrane receptor, plays a role in axonal anterograde transport of cargo towards synapses in axons (PubMed:17062754, PubMed:23011729). Involved in copper homeostasis/oxidative stress through copper ion reduction. In vitro, copper-metallated APP induces neuronal death directly or is potentiated through Cu(2+)-mediated low-density lipoprotein oxidation. Can regulate neurite outgrowth through binding to components of the extracellular matrix such as heparin and collagen I and IV. The splice isoforms that contain the BPTI domain possess protease inhibitor activity. Induces a AGER-dependent pathway that involves activation of p38 MAPK, resulting in internalization of amyloid-beta peptide and leading to mitochondrial dysfunction in cultured cortical neurons. Provides Cu(2+) ions for GPC1 which are required for release of nitric oxide (NO) and subsequent degradation of the heparan sulfate chains on GPC1

Curated MONDO disease pages that list APP among their top associated genes.

Data sources: HGNC (CC BY 4.0), AlphaFold (CC BY 4.0, Jumper et al. Nature 2021), Genomics England PanelApp (CC BY 4.0), ClinGen, Open Targets (CC0), UniProt.

Not for sole clinical decision-making. Always verify against primary sources.