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ARFGEF1

Chr 8q13.2

ARF guanine nucleotide exchange factor 1

Aliases:
DKFZP434L057, BIG1, ARFGEP1, p200
MANE:
ENST00000262215.8

Annotations refreshed 1 month ago.

Predicted protein structure

Clinical relevance (Genomics England PanelApp)

Diagnostic Grade (Green)

  • DDG2P

    MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
  • Early onset or syndromic epilepsy

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
  • Intellectual disability

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Disease associations (Open Targets)

  • developmental delay, impaired speech, and behavioral abnormalities, with or without seizures

    0.76
  • Intellectual disability

    0.65
  • Joubert syndrome 21

    0.55
  • Global developmental delay

    0.53
  • hereditary disease

    0.53
  • Delayed speech and language development

    0.53
  • Atypical behavior

    0.52
  • epilepsy

    0.47
  • Seizure

    0.45
  • Neurodevelopmental delay

    0.38

Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.

Protein function (UniProt)

Brefeldin A-inhibited guanine nucleotide-exchange protein 1

Promotes guanine-nucleotide exchange on ARF1 and ARF3. Promotes the activation of ARF1/ARF3 through replacement of GDP with GTP. Involved in vesicular trafficking. Required for the maintenance of Golgi structure; the function may be independent of its GEF activity. Required for the maturation of integrin beta-1 in the Golgi. Involved in the establishment and persistence of cell polarity during directed cell movement in wound healing. Proposed to act as A kinase-anchoring protein (AKAP) and may mediate crosstalk between Arf and PKA pathways. Inhibits GAP activity of MYO9B probably through competitive RhoA binding. The function in the nucleus remains to be determined

Data sources: HGNC (CC BY 4.0), AlphaFold (CC BY 4.0, Jumper et al. Nature 2021), Genomics England PanelApp (CC BY 4.0), ClinGen, Open Targets (CC0), UniProt.

Not for sole clinical decision-making. Always verify against primary sources.