Skip to content
GenoLensGenoLens

ATR

Chr 3q23

ATR checkpoint kinase

Aliases:
FRP1, SCKL, SCKL1, MEC1
MANE:
ENST00000350721.9

Annotations refreshed 9 hours ago.

Predicted protein structure

Clinical relevance (Genomics England PanelApp)

Diagnostic Grade (Green)

  • DDG2P

    BIALLELIC, autosomal or pseudoautosomal
  • Fetal anomalies

    BIALLELIC, autosomal or pseudoautosomal
  • Intellectual disability

    BIALLELIC, autosomal or pseudoautosomal
  • Severe microcephaly

    BIALLELIC, autosomal or pseudoautosomal
  • Cerebral vascular malformations

    BIALLELIC, autosomal or pseudoautosomal
  • Clefting

    BIALLELIC, autosomal or pseudoautosomal
  • Sarcoma susceptibility

    MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
  • Vascular skin disorders

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

+2 more panels — install the extension to see the full list inline on any page.

Disease associations (Open Targets)

  • Seckel syndrome 1

    0.74
  • familial cutaneous telangiectasia and oropharyngeal predisposition cancer syndrome

    0.67
  • Seckel syndrome

    0.67
  • microcephalic primordial dwarfism

    0.51
  • hereditary disease

    0.47
  • neurodegenerative disease

    0.46
  • non-small cell lung carcinoma

    0.42
  • lung carcinoma

    0.39
  • prostate carcinoma

    0.38
  • skin squamous cell carcinoma

    0.37

Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.

Protein function (UniProt)

Alpha-1-antitrypsin-related protein

Putative serine protease inhibitor

Curated MONDO disease pages that list ATR among their top associated genes.

Data sources: HGNC (CC BY 4.0), AlphaFold (CC BY 4.0, Jumper et al. Nature 2021), Genomics England PanelApp (CC BY 4.0), ClinGen, Open Targets (CC0), UniProt.

Not for sole clinical decision-making. Always verify against primary sources.