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COL10A1

Chr 6q22.1

collagen type X alpha 1 chain

MANE:
ENST00000651968.1

Annotations refreshed 10 hours ago.

Predicted protein structure

Clinical relevance (Genomics England PanelApp)

Diagnostic Grade (Green)

  • DDG2P

    MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
  • Fetal anomalies

    MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
  • Skeletal dysplasia

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
  • Intellectual disability

    MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
  • Osteogenesis imperfecta

Disease associations (Open Targets)

  • Metaphyseal chondrodysplasia, Schmid type

    0.83
  • Schmid metaphyseal chondrodysplasia

    0.80
  • myopia

    0.48
  • Abnormality of the skeletal system

    0.47
  • refractive error

    0.40
  • macular degeneration

    0.39
  • Abnormality of refraction

    0.33
  • carpal tunnel syndrome

    0.29
  • dry age related macular degeneration

    0.29
  • primary angle-closure glaucoma

    0.29

Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.

Protein function (UniProt)

Collagen alpha-1(X) chain

Type X collagen is a product of hypertrophic chondrocytes and has been localized to presumptive mineralization zones of hyaline cartilage

Curated MONDO disease pages that list COL10A1 among their top associated genes.

Data sources: HGNC (CC BY 4.0), AlphaFold (CC BY 4.0, Jumper et al. Nature 2021), Genomics England PanelApp (CC BY 4.0), ClinGen, Open Targets (CC0), UniProt.

Not for sole clinical decision-making. Always verify against primary sources.