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COL9A3

Chr 20q13.33

collagen type IX alpha 3 chain

Aliases:
IDD, MED, EDM3, FLJ90759, DJ885L7.4.1
MANE:
ENST00000649368.1

Annotations refreshed 1 month ago.

Predicted protein structure

Clinical relevance (Genomics England PanelApp)

Diagnostic Grade (Green)

  • DDG2P

    MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
  • Monogenic hearing loss

    BIALLELIC, autosomal or pseudoautosomal
  • Multiple Epiphyseal Dysplasia

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
  • Retinal disorders

    BIALLELIC, autosomal or pseudoautosomal
  • Skeletal dysplasia

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
  • Stickler syndrome

    BIALLELIC, autosomal or pseudoautosomal
  • Arthrogryposis

    MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
  • Clefting

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Disease associations (Open Targets)

  • Stickler syndrome

    0.72
  • epiphyseal dysplasia, multiple, 3

    0.70
  • Stickler syndrome, type 6

    0.65
  • Abnormality of the skeletal system

    0.47
  • intervertebral disk degenerative disorder

    0.46
  • Stickler syndrom, recessive

    0.44
  • hereditary disease

    0.42
  • presbycusis

    0.38
  • multiple epiphyseal dysplasia

    0.37
  • multiple epiphyseal dysplasia due to collagen 9 anomaly

    0.37

Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.

Protein function (UniProt)

Collagen alpha-3(IX) chain

Structural component of hyaline cartilage and vitreous of the eye

Data sources: HGNC (CC BY 4.0), AlphaFold (CC BY 4.0, Jumper et al. Nature 2021), Genomics England PanelApp (CC BY 4.0), ClinGen, Open Targets (CC0), UniProt.

Not for sole clinical decision-making. Always verify against primary sources.