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KLF1

Chr 19p13.13

KLF transcription factor 1

Aliases:
EKLF
MANE:
ENST00000264834.6

Annotations refreshed 1 month ago.

Predicted protein structure

Clinical relevance (Genomics England PanelApp)

Diagnostic Grade (Green)

  • Cytopenia - NOT Fanconi anaemia

    BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
  • Cytopenias and congenital anaemias

    BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
  • DDG2P

    MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
  • Fetal anomalies

    BOTH monoallelic and biallelic, autosomal or pseudoautosomal
  • Fetal hydrops

    BOTH monoallelic and biallelic, autosomal or pseudoautosomal
  • Rare anaemia

    BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
  • Intellectual disability

    MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown

Disease associations (Open Targets)

  • Congenital dyserythropoietic anemia type IV

    0.76
  • congenital dyserythropoietic anemia type 4

    0.76
  • Hereditary persistence of fetal hemoglobin - beta-thalassemia

    0.56
  • hereditary persistence of fetal hemoglobin-sickle cell disease syndrome

    0.56
  • anemia, congenital dyserythropoietic, type IVb

    0.53
  • hydrops fetalis

    0.47
  • hereditary persistence of fetal hemoglobin-beta-thalassemia syndrome

    0.39
  • congenital dyserythropoietic anemia

    0.37
  • neurodegenerative disease

    0.23
  • acute myeloid leukemia

    0.20

Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.

Protein function (UniProt)

Krueppel-like factor 1

Transcription regulator of erythrocyte development that probably serves as a general switch factor during erythropoiesis. Is a dual regulator of fetal-to-adult globin switching. Binds to the CACCC box in the beta-globin gene promoter and acts as a preferential activator of this gene. Furthermore, it binds to the BCL11A promoter and activates expression of BCL11A, which in turn represses the HBG1 and HBG2 genes. This dual activity ensures that, in most adults, fetal hemoglobin levels are low. Able to activate CD44 and AQP1 promoters (PubMed:21055716). When sumoylated, acts as a transcriptional repressor by promoting interaction with CDH2/MI2beta and also represses megakaryocytic differentiation

Curated MONDO disease pages that list KLF1 among their top associated genes.

Data sources: HGNC (CC BY 4.0), AlphaFold (CC BY 4.0, Jumper et al. Nature 2021), Genomics England PanelApp (CC BY 4.0), ClinGen, Open Targets (CC0), UniProt.

Not for sole clinical decision-making. Always verify against primary sources.