AlphaFold predicted structure
NKX2-5 · P52952

Mean pLDDT
62.6/ 100
Low
324 residues
Confidence breakdown
- Very high(≥ 90)17%
- Confident(70–90)11%
- Low(50–70)34%
- Very low(< 50)38%
AlphaFold (Jumper et al., 2021) · CC BY 4.0
NK2 homeobox 5
Annotations refreshed 1 month ago.
Diagnostic Grade (Green)
DDG2P
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknownDilated and arrhythmogenic cardiomyopathy
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknownFamilial non syndromic congenital heart disease
MONOALLELIC, autosomal or pseudoautosomal, NOT imprintedFetal anomalies
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknownPaediatric or syndromic cardiomyopathy
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknownProgressive cardiac conduction disease
MONOALLELIC, autosomal or pseudoautosomal, NOT imprintedCongenital hypothyroidism
MONOALLELIC, autosomal or pseudoautosomal, NOT imprintedLaterality disorders and isomerism
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown+8 more panels — install the extension to see the full list inline on any page.
Atrial septal defect - atrioventricular conduction defects
atrial septal defect 7
Tetralogy of Fallot
atrial septal defect
hypothyroidism, congenital, nongoitrous, 5
ventricular septal defect 3
hypoplastic left heart syndrome 2
conotruncal heart malformations
Abnormality of the cardiovascular system
atrial fibrillation
Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.
Homeobox protein Nkx-2.5
Transcription factor required for the development of the heart and the spleen (PubMed:22560297). During heart development, acts as a transcriptional activator of NPPA/ANF in cooperation with GATA4 (By similarity). May cooperate with TBX2 to negatively modulate expression of NPPA/ANF in the atrioventricular canal (By similarity). Binds to the core DNA motif of NPPA promoter (PubMed:22849347, PubMed:26926761). Together with PBX1, required for spleen development through a mechanism that involves CDKN2B repression (PubMed:22560297). Positively regulates transcription of genes such as COL3A1 and MMP2, resulting in increased pulmonary endothelial fibrosis in response to hypoxia (PubMed:29899023)
NKX2-5 · P52952

Mean pLDDT
62.6/ 100
Low
324 residues
Confidence breakdown
AlphaFold (Jumper et al., 2021) · CC BY 4.0