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NLRP2

Chr 19q13.42

NLR family pyrin domain containing 2

Aliases:
FLJ20510, PYPAF2, NBS1, PAN1, CLR19.9
MANE:
ENST00000448584.7

Annotations refreshed 9 hours ago.

Predicted protein structure

Clinical relevance (Genomics England PanelApp)

Diagnostic Grade (Green)

  • Multi locus imprinting disorders

    BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
  • Monogenic short stature

    BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
  • Segmental overgrowth disorders - Deep sequencing

    BOTH monoallelic and biallelic, autosomal or pseudoautosomal

Disease associations (Open Targets)

  • oocyte/zygote/embryo maturation arrest 18

    0.63
  • Beckwith-Wiedemann syndrome due to imprinting defect of 11p15

    0.42
  • CINCA syndrome

    0.18
  • response to xenobiotic stimulus

    0.11
  • stricture

    0.09
  • Alzheimer disease

    0.08
  • retinitis pigmentosa

    0.06
  • Leber congenital amaurosis

    0.06
  • Familial exudative vitreoretinopathy

    0.06
  • Cone rod dystrophy

    0.06

Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.

Protein function (UniProt)

NACHT, LRR and PYD domains-containing protein 2

Suppresses TNF- and CD40-induced NFKB1 activity at the level of the IKK complex, by inhibiting NFKBIA degradation induced by TNF. When associated with PYCARD, activates CASP1, leading to the secretion of mature pro-inflammatory cytokine IL1B. May be a component of the inflammasome, a protein complex which also includes PYCARD, CARD8 and CASP1 and whose function would be the activation of pro-inflammatory caspases

Data sources: HGNC (CC BY 4.0), AlphaFold (CC BY 4.0, Jumper et al. Nature 2021), Genomics England PanelApp (CC BY 4.0), ClinGen, Open Targets (CC0), UniProt.

Not for sole clinical decision-making. Always verify against primary sources.