AlphaFold predicted structure
VIPAS39 · Q9H9C1


Mean pLDDT
78.1/ 100
Confident
493 residues
Confidence breakdown
- Very high(≥ 90)64%
- Confident(70–90)4%
- Low(50–70)7%
- Very low(< 50)24%
AlphaFold (Jumper et al., 2021) · CC BY 4.0
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
Annotations refreshed 1 month ago.
Diagnostic Grade (Green)
Arthrogryposis
BIALLELIC, autosomal or pseudoautosomalBleeding and platelet disorders
BIALLELIC, autosomal or pseudoautosomalCholestasis
BIALLELIC, autosomal or pseudoautosomalDDG2P
BIALLELIC, autosomal or pseudoautosomalFetal anomalies
BIALLELIC, autosomal or pseudoautosomalInherited bleeding disorders
BIALLELIC, autosomal or pseudoautosomalLikely inborn error of metabolism
BIALLELIC, autosomal or pseudoautosomalNeonatal cholestasis
BIALLELIC, autosomal or pseudoautosomal+9 more panels — install the extension to see the full list inline on any page.
Arthrogryposis - renal dysfunction - cholestasis
arthrogryposis-renal dysfunction-cholestasis syndrome
arthrogryposis, renal dysfunction, and cholestasis 1
hereditary disease
neoplasm
Abnormal renal physiology
cholestasis
arthrogryposis
ovarian carcinoma
ichthyosis
Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.
Spermatogenesis-defective protein 39 homolog
Proposed to be involved in endosomal maturation implicating in part VPS33B. In epithelial cells, the VPS33B:VIPAS39 complex may play a role in the apical RAB11A-dependent recycling pathway and in the maintenance of the apical-basolateral polarity (PubMed:20190753). May play a role in lysosomal trafficking, probably via association with the core HOPS complex in a discrete population of endosomes; the functions seems to be independent of VPS33B (PubMed:19109425). May play a role in vesicular trafficking during spermatogenesis (By similarity). May be involved in direct or indirect transcriptional regulation of E-cadherin (By similarity)
VIPAS39 · Q9H9C1


Mean pLDDT
78.1/ 100
Confident
493 residues
Confidence breakdown
AlphaFold (Jumper et al., 2021) · CC BY 4.0