AlphaFold predicted structure
ZNFX1 · Q9P2E3

Mean pLDDT
73.9/ 100
Confident
1,918 residues
Confidence breakdown
- Very high(≥ 90)15%
- Confident(70–90)58%
- Low(50–70)12%
- Very low(< 50)15%
AlphaFold (Jumper et al., 2021) · CC BY 4.0
zinc finger NFX1-type containing 1
Annotations refreshed 1 month ago.
Diagnostic Grade (Green)
Early onset or syndromic epilepsy
BIALLELIC, autosomal or pseudoautosomalIntellectual disability
BIALLELIC, autosomal or pseudoautosomalPrimary immunodeficiency or monogenic inflammatory bowel disease
BIALLELIC, autosomal or pseudoautosomalimmunodeficiency 91 and hyperinflammation
ovarian neoplasm
hereditary disease
undetermined early-onset epileptic encephalopathy
atrial fibrillation
hepatocellular carcinoma
colorectal carcinoma
myocardial infarction
lung cancer
lung carcinoma
Score is the Open Targets composite evidence score (0-1). Higher = stronger gene-disease association.
NFX1-type zinc finger-containing protein 1
RNA-activated non-canonical E3 ubiquitin ligase required for cell survival during interferon (IFN) responses. Functions as an ATP-dependent 5'-> 3' RNA translocase that selectively recognizes long single-stranded RNA (ssRNA) molecules (>100 nt) from viral or host origin during immune activation. Upon ssRNA binding, oligomerizes to assemble a split E3 active site in trans, involving the Z-RING domain that binds and activates E2-ubiquitin conjugates, such as UBE2D2, and the RZ catalytic domain that mediates ubiquitin transfer. Catalyzes hydroxyl ubiquitination of the 2'-OH of ssRNA ribose and auto-ubiquitination, generating mainly 'Lys-48'- and 'Lys-6'-linked polyubiquitin chains (PubMed:40876457). Forms ubiquitin-coated RNA condensates and stress granules, thereby regulating RNA metabolism, limiting excessive immune signaling, and preventing IFN-induced cell death (PubMed:33872655, PubMed:40876457). Also required for immunity against some bacteria, such as mycobacteria (PubMed:33876776). Inhibits NLRP3 inflammasome activation by sequestering NLRP3 in the cytoplasm and preventing its translocation to trans-Golgi network vesicles during the resting state. Upon inflammasome activation, is cleaved by CASP1, establishing a feed-forward loop that amplifies NLRP3 inflammasome activity (PubMed:39333773)
ZNFX1 · Q9P2E3

Mean pLDDT
73.9/ 100
Confident
1,918 residues
Confidence breakdown
AlphaFold (Jumper et al., 2021) · CC BY 4.0